corrections based on authors comment.
Integration of a new Latex file with
highlighted modifications.

the Editor and the Reviewers, after initial submission.

- clarify that paper present already published but
  not necesseraly available data
- cite datasets
- add details on harmonization
- add bibtool files to clean .bib
- remove all M&M that is duplicated from papers
- remove no more used figure and code

- remove old image from template

- add figure 1 by CD
- fix summary that was too long
- remove TODO
- fix "bacteria" without "archaea" for 16S
- fix some typo
- add info in links

- add qPCR in data record
- add Djemiel et.al. 2023 citation
- add janitor package citation

- add todocx.sh file to export to docx
- add a simple docx template
- remove frames
- move instruction from frame to comments

- add text for control sample
- correct unit mu symbol
- change figure
- rewrite some text parts

- Mainly A.C. input on S.T. text
- Finish Code availability part

add usages notes, code availability,
acknowledgements, author contributions
statement, competing interests,
figures with legends, more citations

tweak cleanup.sh to remove more build
files

Managing conflicts between two different versions.

maybe :
- useful to add a small table with number of row/col
- add multifacet simple figure to illustrate distribution of each data file

of the technical validation part. Some new ideas and
references (still errors).

Adding new references, but errors in the bibtex compilation.

- compile.sh to build it
- cleanup.sh to remove all temp file

- add some remarks
- add paper example in comment
- put instruction in framed to keep them in pdf but not mixed in text