diff --git a/README.md b/README.md
index b6445721d7b8f9222c0d2b958566eb25def6bae2..cc713158fe8e91a8049a9c8715fb4b68e96ce8fb 100644
--- a/README.md
+++ b/README.md
@@ -28,9 +28,9 @@ npm run dev
### Test
```sh
-# unit testing (Vitest) :
+# unit testing (Vitest):
npm run test:unit
-# end-to-end testing (Cypress) :
+# end-to-end testing (Cypress):
npm run test:e2e
```
@@ -111,7 +111,7 @@ import ... from '@/assets/path/to/asset'
### Tailwind classes with Vue
-Vue has several ways to define classes, including an [object syntax](https://vuejs.org/guide/essentials/class-and-style.html#binding-to-objects) and an [array syntax](https://vuejs.org/guide/essentials/class-and-style.html#binding-to-arrays). To deal with Tailwind's classes in a consistent way, the following guidelines should be observed :
+Vue has several ways to define classes, including an [object syntax](https://vuejs.org/guide/essentials/class-and-style.html#binding-to-objects) and an [array syntax](https://vuejs.org/guide/essentials/class-and-style.html#binding-to-arrays). To deal with Tailwind's classes in a consistent way, the following guidelines should be observed:
- Write predetermined classes inline:
```ts
class="class-1 class-2..."
diff --git a/package-lock.json b/package-lock.json
index 63d740aab6b1a963108bf2c57d98492d875cf0f9..eb2405660d9b86f3e1b789bea4de007b052dd9ac 100644
--- a/package-lock.json
+++ b/package-lock.json
@@ -29,6 +29,7 @@
"@graphql-codegen/client-preset": "^4.1.0",
"@graphql-eslint/eslint-plugin": "^3.20.1",
"@iconify-json/carbon": "^1.1.18",
+ "@iconify-json/emojione": "^1.1.10",
"@iconify-json/fa": "^1.1.4",
"@iconify-json/fa-regular": "^1.1.5",
"@iconify-json/fa6-regular": "^1.1.13",
@@ -3962,6 +3963,15 @@
"@iconify/types": "*"
}
},
+ "node_modules/@iconify-json/emojione": {
+ "version": "1.1.10",
+ "resolved": "https://registry.npmjs.org/@iconify-json/emojione/-/emojione-1.1.10.tgz",
+ "integrity": "sha512-gzv5tbkbyoJFArWmmtGDmhvKjCcpa9a+qEFbW35IlKHc9LBL5lluRccP+BckCoYcoi5qi1VCPxzz6QL/UYW5VQ==",
+ "dev": true,
+ "dependencies": {
+ "@iconify/types": "*"
+ }
+ },
"node_modules/@iconify-json/fa": {
"version": "1.1.4",
"resolved": "https://registry.npmjs.org/@iconify-json/fa/-/fa-1.1.4.tgz",
diff --git a/package.json b/package.json
index c2c49c10ed7b48b6f60e7ad975d565ea61762d89..0139b28b9c24886526b71662db92792815a167ff 100644
--- a/package.json
+++ b/package.json
@@ -42,6 +42,7 @@
"@graphql-codegen/client-preset": "^4.1.0",
"@graphql-eslint/eslint-plugin": "^3.20.1",
"@iconify-json/carbon": "^1.1.18",
+ "@iconify-json/emojione": "^1.1.10",
"@iconify-json/fa": "^1.1.4",
"@iconify-json/fa-regular": "^1.1.5",
"@iconify-json/fa6-regular": "^1.1.13",
diff --git a/src/components/BaseLinkListCard.vue b/src/components/BaseLinkListCard.vue
index 9ab290e07a743898a04784cc98e1ea81c29890c2..7cf161c8dfd6425f8caf3f21f9dff505db34dc8a 100644
--- a/src/components/BaseLinkListCard.vue
+++ b/src/components/BaseLinkListCard.vue
@@ -32,6 +32,7 @@ const props = defineProps<{
listTitle?: string
linkItems: LinkListItemModel[]
color?: TailwindBaseColorModel
+ outlined?: boolean
disabled?: boolean
hoverEvent?: boolean
}>()
@@ -70,9 +71,11 @@ defineExpose({ scrollToListTop })
<template>
<Card
- :class="['!border', `!border-${color || 'slate'}-600`]"
+ :class="
+ outlined ? ['!border', `!border-${color || 'slate'}-600`] : '!shadow-none'
+ "
:pt="{
- body: { class: '!pr-0' },
+ body: { class: outlined ? '!pr-0' : '!p-0' },
content: {
class: '!py-0'
}
diff --git a/src/gql/codegen/gql.ts b/src/gql/codegen/gql.ts
index c4bbfe4d1e65b79026683ade1450386a58284f69..251b4d7db639ea81279304cb2f128e10733c92a5 100644
--- a/src/gql/codegen/gql.ts
+++ b/src/gql/codegen/gql.ts
@@ -17,8 +17,9 @@ const documents = {
"\n query tableEntriesQuery {\n tableEntries {\n id\n modification {\n id\n name\n position\n result\n target {\n id\n name\n type\n length\n genome {\n species {\n id\n name\n }\n }\n parentConnection(where: { node: { featureType: Chromosome } }) {\n edges {\n start\n end\n strand\n node {\n id\n name\n }\n }\n }\n }\n }\n guide {\n id\n name\n type\n subtype\n length\n seq\n parentConnection(where: { node: { featureType: Chromosome } }) {\n edges {\n start\n end\n strand\n node {\n id\n name\n length\n }\n }\n }\n }\n }\n }\n": types.TableEntriesQueryDocument,
"\n query speciesByIdQuery(\n $where: SpeciesWhere\n $modificationsWhere: ModificationWhere\n $targetsWhere: TargetWhere\n $guidesWhere: GuideWhere\n ) {\n manySpecies(where: $where) {\n id\n name\n shortname\n genomes {\n sequences(where: { featureType: Chromosome }) {\n id\n name\n length\n featuresConnection(where: { node: { featureType: Guide } }) {\n totalCount\n }\n }\n }\n }\n modifications(where: $modificationsWhere) {\n id\n name\n result\n guidesAggregate {\n count\n }\n }\n targets(where: $targetsWhere) {\n id\n name\n type\n modificationsAggregate {\n count\n }\n }\n guides(where: $guidesWhere) {\n id\n name\n type\n subtype\n parentConnection(where: { node: { featureType: Chromosome } }) {\n edges {\n start\n end\n node {\n id\n }\n }\n }\n modificationsAggregate {\n count\n }\n }\n }\n": types.SpeciesByIdQueryDocument,
"\n query modificationByIdQuery(\n $where: ModificationWhere\n $guidesWhere: GuideWhere\n $interactionsWhere: InteractionWhere\n ) {\n modifications(where: $where) {\n id\n name\n type\n result\n position\n target {\n id\n name\n type\n genome {\n species {\n id\n name\n }\n }\n }\n # chebi_id\n # so_id\n }\n guides(where: $guidesWhere) {\n id\n name\n type\n }\n interactions(where: $interactionsWhere) {\n duplexes {\n strandsConnection {\n edges {\n start\n end\n primary\n node {\n id\n seq\n parentConnection {\n edges {\n start\n end\n }\n }\n }\n }\n }\n index\n }\n guide {\n id\n name\n subtype\n }\n target {\n id\n name\n type\n }\n }\n }\n": types.ModificationByIdQueryDocument,
- "\n query guideByIdQuery($where: GuideWhere, $targetsWhere: TargetWhere) {\n guides(where: $where) {\n id\n name\n length\n subtype\n type\n parentConnection(where: { node: { featureType: Chromosome } }) {\n edges {\n start\n end\n strand\n node {\n ... on Chromosome {\n id\n name\n length\n }\n }\n }\n }\n seq\n genome {\n species {\n id\n name\n }\n }\n modifications {\n id\n name\n target {\n id\n name\n type\n }\n }\n modificationsAggregate {\n count\n }\n interactions {\n duplexes {\n strandsConnection {\n edges {\n start\n end\n primary\n node {\n id\n seq\n parentConnection {\n edges {\n start\n end\n }\n }\n }\n }\n }\n index\n }\n modification {\n id\n name\n position\n result\n type\n }\n target {\n id\n name\n type\n }\n }\n chebi_id\n so_id\n }\n targets(where: $targetsWhere) {\n id\n name\n type\n }\n }\n": types.GuideByIdQueryDocument,
+ "\n query guideByIdQuery($where: GuideWhere, $targetsWhere: TargetWhere) {\n guides(where: $where) {\n id\n name\n length\n subtype\n type\n parentConnection(where: { node: { featureType: Chromosome } }) {\n edges {\n start\n end\n strand\n node {\n ... on Chromosome {\n id\n name\n length\n }\n }\n }\n }\n seq\n genome {\n species {\n id\n name\n }\n }\n modifications {\n id\n name\n target {\n id\n name\n type\n }\n }\n modificationsAggregate {\n count\n }\n interactions {\n duplexes {\n strandsConnection {\n edges {\n start\n end\n primary\n node {\n id\n seq\n parentConnection {\n edges {\n start\n end\n }\n }\n }\n }\n }\n index\n }\n modification {\n id\n name\n position\n result\n type\n }\n target {\n id\n name\n type\n }\n }\n cluster {\n id\n }\n clusterAggregate {\n count\n }\n chebi_id\n so_id\n }\n targets(where: $targetsWhere) {\n id\n name\n type\n }\n }\n": types.GuideByIdQueryDocument,
"\n query targetByIdQuery($where: TargetWhere, $guidesWhere: GuideWhere) {\n targets(where: $where) {\n id\n name\n length\n type\n parentConnection(where: { node: { featureType: Chromosome } }) {\n edges {\n start\n end\n strand\n node {\n ... on Chromosome {\n name\n }\n }\n }\n }\n seq\n genome {\n species {\n id\n name\n }\n }\n modifications {\n id\n name\n position\n }\n modificationsAggregate {\n count\n }\n interactions {\n duplexes {\n strandsConnection {\n edges {\n start\n end\n primary\n node {\n seq\n parentConnection {\n edges {\n start\n end\n }\n }\n }\n }\n }\n index\n }\n modification {\n id\n name\n position\n result\n type\n }\n guide {\n id\n name\n subtype\n }\n }\n chebi_id\n so_id\n url\n secondary_struct_file\n }\n guides(where: $guidesWhere) {\n id\n name\n type\n }\n }\n": types.TargetByIdQueryDocument,
+ "\n query clusterByIdQuery($where: ClusterWhere) {\n clusters(where: $where) {\n id\n guides {\n id\n name\n type\n subtype\n modificationsAggregate {\n count\n }\n parentConnection(where: { node: { featureType: Chromosome } }) {\n edges {\n start\n end\n }\n }\n }\n guidesAggregate {\n count\n }\n referenceGuide: guides(options: { limit: 1 }) {\n parent {\n id\n name\n }\n genome {\n species {\n name\n id\n }\n }\n }\n }\n }\n": types.ClusterByIdQueryDocument,
};
/**
@@ -54,11 +55,15 @@ export function graphql(source: "\n query modificationByIdQuery(\n $where: M
/**
* The graphql function is used to parse GraphQL queries into a document that can be used by GraphQL clients.
*/
-export function graphql(source: "\n query guideByIdQuery($where: GuideWhere, $targetsWhere: TargetWhere) {\n guides(where: $where) {\n id\n name\n length\n subtype\n type\n parentConnection(where: { node: { featureType: Chromosome } }) {\n edges {\n start\n end\n strand\n node {\n ... on Chromosome {\n id\n name\n length\n }\n }\n }\n }\n seq\n genome {\n species {\n id\n name\n }\n }\n modifications {\n id\n name\n target {\n id\n name\n type\n }\n }\n modificationsAggregate {\n count\n }\n interactions {\n duplexes {\n strandsConnection {\n edges {\n start\n end\n primary\n node {\n id\n seq\n parentConnection {\n edges {\n start\n end\n }\n }\n }\n }\n }\n index\n }\n modification {\n id\n name\n position\n result\n type\n }\n target {\n id\n name\n type\n }\n }\n chebi_id\n so_id\n }\n targets(where: $targetsWhere) {\n id\n name\n type\n }\n }\n"): (typeof documents)["\n query guideByIdQuery($where: GuideWhere, $targetsWhere: TargetWhere) {\n guides(where: $where) {\n id\n name\n length\n subtype\n type\n parentConnection(where: { node: { featureType: Chromosome } }) {\n edges {\n start\n end\n strand\n node {\n ... on Chromosome {\n id\n name\n length\n }\n }\n }\n }\n seq\n genome {\n species {\n id\n name\n }\n }\n modifications {\n id\n name\n target {\n id\n name\n type\n }\n }\n modificationsAggregate {\n count\n }\n interactions {\n duplexes {\n strandsConnection {\n edges {\n start\n end\n primary\n node {\n id\n seq\n parentConnection {\n edges {\n start\n end\n }\n }\n }\n }\n }\n index\n }\n modification {\n id\n name\n position\n result\n type\n }\n target {\n id\n name\n type\n }\n }\n chebi_id\n so_id\n }\n targets(where: $targetsWhere) {\n id\n name\n type\n }\n }\n"];
+export function graphql(source: "\n query guideByIdQuery($where: GuideWhere, $targetsWhere: TargetWhere) {\n guides(where: $where) {\n id\n name\n length\n subtype\n type\n parentConnection(where: { node: { featureType: Chromosome } }) {\n edges {\n start\n end\n strand\n node {\n ... on Chromosome {\n id\n name\n length\n }\n }\n }\n }\n seq\n genome {\n species {\n id\n name\n }\n }\n modifications {\n id\n name\n target {\n id\n name\n type\n }\n }\n modificationsAggregate {\n count\n }\n interactions {\n duplexes {\n strandsConnection {\n edges {\n start\n end\n primary\n node {\n id\n seq\n parentConnection {\n edges {\n start\n end\n }\n }\n }\n }\n }\n index\n }\n modification {\n id\n name\n position\n result\n type\n }\n target {\n id\n name\n type\n }\n }\n cluster {\n id\n }\n clusterAggregate {\n count\n }\n chebi_id\n so_id\n }\n targets(where: $targetsWhere) {\n id\n name\n type\n }\n }\n"): (typeof documents)["\n query guideByIdQuery($where: GuideWhere, $targetsWhere: TargetWhere) {\n guides(where: $where) {\n id\n name\n length\n subtype\n type\n parentConnection(where: { node: { featureType: Chromosome } }) {\n edges {\n start\n end\n strand\n node {\n ... on Chromosome {\n id\n name\n length\n }\n }\n }\n }\n seq\n genome {\n species {\n id\n name\n }\n }\n modifications {\n id\n name\n target {\n id\n name\n type\n }\n }\n modificationsAggregate {\n count\n }\n interactions {\n duplexes {\n strandsConnection {\n edges {\n start\n end\n primary\n node {\n id\n seq\n parentConnection {\n edges {\n start\n end\n }\n }\n }\n }\n }\n index\n }\n modification {\n id\n name\n position\n result\n type\n }\n target {\n id\n name\n type\n }\n }\n cluster {\n id\n }\n clusterAggregate {\n count\n }\n chebi_id\n so_id\n }\n targets(where: $targetsWhere) {\n id\n name\n type\n }\n }\n"];
/**
* The graphql function is used to parse GraphQL queries into a document that can be used by GraphQL clients.
*/
export function graphql(source: "\n query targetByIdQuery($where: TargetWhere, $guidesWhere: GuideWhere) {\n targets(where: $where) {\n id\n name\n length\n type\n parentConnection(where: { node: { featureType: Chromosome } }) {\n edges {\n start\n end\n strand\n node {\n ... on Chromosome {\n name\n }\n }\n }\n }\n seq\n genome {\n species {\n id\n name\n }\n }\n modifications {\n id\n name\n position\n }\n modificationsAggregate {\n count\n }\n interactions {\n duplexes {\n strandsConnection {\n edges {\n start\n end\n primary\n node {\n seq\n parentConnection {\n edges {\n start\n end\n }\n }\n }\n }\n }\n index\n }\n modification {\n id\n name\n position\n result\n type\n }\n guide {\n id\n name\n subtype\n }\n }\n chebi_id\n so_id\n url\n secondary_struct_file\n }\n guides(where: $guidesWhere) {\n id\n name\n type\n }\n }\n"): (typeof documents)["\n query targetByIdQuery($where: TargetWhere, $guidesWhere: GuideWhere) {\n targets(where: $where) {\n id\n name\n length\n type\n parentConnection(where: { node: { featureType: Chromosome } }) {\n edges {\n start\n end\n strand\n node {\n ... on Chromosome {\n name\n }\n }\n }\n }\n seq\n genome {\n species {\n id\n name\n }\n }\n modifications {\n id\n name\n position\n }\n modificationsAggregate {\n count\n }\n interactions {\n duplexes {\n strandsConnection {\n edges {\n start\n end\n primary\n node {\n seq\n parentConnection {\n edges {\n start\n end\n }\n }\n }\n }\n }\n index\n }\n modification {\n id\n name\n position\n result\n type\n }\n guide {\n id\n name\n subtype\n }\n }\n chebi_id\n so_id\n url\n secondary_struct_file\n }\n guides(where: $guidesWhere) {\n id\n name\n type\n }\n }\n"];
+/**
+ * The graphql function is used to parse GraphQL queries into a document that can be used by GraphQL clients.
+ */
+export function graphql(source: "\n query clusterByIdQuery($where: ClusterWhere) {\n clusters(where: $where) {\n id\n guides {\n id\n name\n type\n subtype\n modificationsAggregate {\n count\n }\n parentConnection(where: { node: { featureType: Chromosome } }) {\n edges {\n start\n end\n }\n }\n }\n guidesAggregate {\n count\n }\n referenceGuide: guides(options: { limit: 1 }) {\n parent {\n id\n name\n }\n genome {\n species {\n name\n id\n }\n }\n }\n }\n }\n"): (typeof documents)["\n query clusterByIdQuery($where: ClusterWhere) {\n clusters(where: $where) {\n id\n guides {\n id\n name\n type\n subtype\n modificationsAggregate {\n count\n }\n parentConnection(where: { node: { featureType: Chromosome } }) {\n edges {\n start\n end\n }\n }\n }\n guidesAggregate {\n count\n }\n referenceGuide: guides(options: { limit: 1 }) {\n parent {\n id\n name\n }\n genome {\n species {\n name\n id\n }\n }\n }\n }\n }\n"];
export function graphql(source: string) {
return (documents as any)[source] ?? {};
diff --git a/src/gql/codegen/graphql.ts b/src/gql/codegen/graphql.ts
index d0cc0dd7b5e8ceab84e4f812116e57124631c576..11bbc0d31d14615c6fd8436cb7b7a8587782aa6a 100644
--- a/src/gql/codegen/graphql.ts
+++ b/src/gql/codegen/graphql.ts
@@ -5870,7 +5870,7 @@ export type GuideByIdQueryQueryVariables = Exact<{
}>;
-export type GuideByIdQueryQuery = { __typename?: 'Query', guides: Array<{ __typename?: 'Guide', id: string, name?: string | null, length: number, subtype: GuideType, type: SequenceType, seq?: string | null, chebi_id?: string | null, so_id?: string | null, parentConnection: { __typename?: 'GuideParentConnection', edges: Array<{ __typename?: 'GuideParentRelationship', start: number, end: number, strand?: Strand | null, node: { __typename?: 'Chromosome', id: string, name?: string | null, length: number } | { __typename?: 'FeatureSequence' } | { __typename?: 'Guide' } | { __typename?: 'Target' } }> }, genome?: { __typename?: 'Genome', species?: { __typename?: 'Species', id: number, name: string } | null } | null, modifications: Array<{ __typename?: 'Modification', id: string, name: string, target: { __typename?: 'Target', id: string, name?: string | null, type: SequenceType } }>, modificationsAggregate?: { __typename?: 'GuideModificationModificationsAggregationSelection', count: number } | null, interactions: Array<{ __typename?: 'Interaction', duplexes: Array<{ __typename?: 'Duplex', index: number, strandsConnection: { __typename?: 'DuplexStrandsConnection', edges: Array<{ __typename?: 'DuplexStrandsRelationship', start: number, end: number, primary?: boolean | null, node: { __typename?: 'FeatureSequence', id: string, seq?: string | null, parentConnection: { __typename?: 'FeatureSequenceParentConnection', edges: Array<{ __typename?: 'FeatureSequenceParentRelationship', start: number, end: number }> } } }> } }>, modification: { __typename?: 'Modification', id: string, name: string, position: number, result: string, type?: ModifType | null }, target: { __typename?: 'Target', id: string, name?: string | null, type: SequenceType } }> }>, targets: Array<{ __typename?: 'Target', id: string, name?: string | null, type: SequenceType }> };
+export type GuideByIdQueryQuery = { __typename?: 'Query', guides: Array<{ __typename?: 'Guide', id: string, name?: string | null, length: number, subtype: GuideType, type: SequenceType, seq?: string | null, chebi_id?: string | null, so_id?: string | null, parentConnection: { __typename?: 'GuideParentConnection', edges: Array<{ __typename?: 'GuideParentRelationship', start: number, end: number, strand?: Strand | null, node: { __typename?: 'Chromosome', id: string, name?: string | null, length: number } | { __typename?: 'FeatureSequence' } | { __typename?: 'Guide' } | { __typename?: 'Target' } }> }, genome?: { __typename?: 'Genome', species?: { __typename?: 'Species', id: number, name: string } | null } | null, modifications: Array<{ __typename?: 'Modification', id: string, name: string, target: { __typename?: 'Target', id: string, name?: string | null, type: SequenceType } }>, modificationsAggregate?: { __typename?: 'GuideModificationModificationsAggregationSelection', count: number } | null, interactions: Array<{ __typename?: 'Interaction', duplexes: Array<{ __typename?: 'Duplex', index: number, strandsConnection: { __typename?: 'DuplexStrandsConnection', edges: Array<{ __typename?: 'DuplexStrandsRelationship', start: number, end: number, primary?: boolean | null, node: { __typename?: 'FeatureSequence', id: string, seq?: string | null, parentConnection: { __typename?: 'FeatureSequenceParentConnection', edges: Array<{ __typename?: 'FeatureSequenceParentRelationship', start: number, end: number }> } } }> } }>, modification: { __typename?: 'Modification', id: string, name: string, position: number, result: string, type?: ModifType | null }, target: { __typename?: 'Target', id: string, name?: string | null, type: SequenceType } }>, cluster?: { __typename?: 'Cluster', id: string } | null, clusterAggregate?: { __typename?: 'GuideClusterClusterAggregationSelection', count: number } | null }>, targets: Array<{ __typename?: 'Target', id: string, name?: string | null, type: SequenceType }> };
export type TargetByIdQueryQueryVariables = Exact<{
where?: InputMaybe<TargetWhere>;
@@ -5880,10 +5880,18 @@ export type TargetByIdQueryQueryVariables = Exact<{
export type TargetByIdQueryQuery = { __typename?: 'Query', targets: Array<{ __typename?: 'Target', id: string, name?: string | null, length: number, type: SequenceType, seq?: string | null, chebi_id?: string | null, so_id?: string | null, url?: string | null, secondary_struct_file?: string | null, parentConnection: { __typename?: 'TargetParentConnection', edges: Array<{ __typename?: 'TargetParentRelationship', start: number, end: number, strand?: Strand | null, node: { __typename?: 'Chromosome', name?: string | null } | { __typename?: 'FeatureSequence' } | { __typename?: 'Guide' } | { __typename?: 'Target' } }> }, genome?: { __typename?: 'Genome', species?: { __typename?: 'Species', id: number, name: string } | null } | null, modifications: Array<{ __typename?: 'Modification', id: string, name: string, position: number }>, modificationsAggregate?: { __typename?: 'TargetModificationModificationsAggregationSelection', count: number } | null, interactions: Array<{ __typename?: 'Interaction', duplexes: Array<{ __typename?: 'Duplex', index: number, strandsConnection: { __typename?: 'DuplexStrandsConnection', edges: Array<{ __typename?: 'DuplexStrandsRelationship', start: number, end: number, primary?: boolean | null, node: { __typename?: 'FeatureSequence', seq?: string | null, parentConnection: { __typename?: 'FeatureSequenceParentConnection', edges: Array<{ __typename?: 'FeatureSequenceParentRelationship', start: number, end: number }> } } }> } }>, modification: { __typename?: 'Modification', id: string, name: string, position: number, result: string, type?: ModifType | null }, guide: { __typename?: 'Guide', id: string, name?: string | null, subtype: GuideType } }> }>, guides: Array<{ __typename?: 'Guide', id: string, name?: string | null, type: SequenceType }> };
+export type ClusterByIdQueryQueryVariables = Exact<{
+ where?: InputMaybe<ClusterWhere>;
+}>;
+
+
+export type ClusterByIdQueryQuery = { __typename?: 'Query', clusters: Array<{ __typename?: 'Cluster', id: string, guides: Array<{ __typename?: 'Guide', id: string, name?: string | null, type: SequenceType, subtype: GuideType, modificationsAggregate?: { __typename?: 'GuideModificationModificationsAggregationSelection', count: number } | null, parentConnection: { __typename?: 'GuideParentConnection', edges: Array<{ __typename?: 'GuideParentRelationship', start: number, end: number }> } }>, guidesAggregate?: { __typename?: 'ClusterGuideGuidesAggregationSelection', count: number } | null, referenceGuide: Array<{ __typename?: 'Guide', parent?: { __typename?: 'Chromosome', id: string, name?: string | null } | { __typename?: 'FeatureSequence', id: string, name?: string | null } | { __typename?: 'Guide', id: string, name?: string | null } | { __typename?: 'Target', id: string, name?: string | null } | null, genome?: { __typename?: 'Genome', species?: { __typename?: 'Species', name: string, id: number } | null } | null }> }> };
+
export const SpeciesListQueryDocument = {"kind":"Document","definitions":[{"kind":"OperationDefinition","operation":"query","name":{"kind":"Name","value":"speciesListQuery"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"manySpecies"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"shortname"}}]}}]}}]} as unknown as DocumentNode<SpeciesListQueryQuery, SpeciesListQueryQueryVariables>;
export const TableEntriesQueryDocument = {"kind":"Document","definitions":[{"kind":"OperationDefinition","operation":"query","name":{"kind":"Name","value":"tableEntriesQuery"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"tableEntries"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"modification"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"position"}},{"kind":"Field","name":{"kind":"Name","value":"result"}},{"kind":"Field","name":{"kind":"Name","value":"target"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"type"}},{"kind":"Field","name":{"kind":"Name","value":"length"}},{"kind":"Field","name":{"kind":"Name","value":"genome"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"species"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"parentConnection"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"node"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"featureType"},"value":{"kind":"EnumValue","value":"Chromosome"}}]}}]}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"edges"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"start"}},{"kind":"Field","name":{"kind":"Name","value":"end"}},{"kind":"Field","name":{"kind":"Name","value":"strand"}},{"kind":"Field","name":{"kind":"Name","value":"node"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}}]}}]}}]}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"guide"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"type"}},{"kind":"Field","name":{"kind":"Name","value":"subtype"}},{"kind":"Field","name":{"kind":"Name","value":"length"}},{"kind":"Field","name":{"kind":"Name","value":"seq"}},{"kind":"Field","name":{"kind":"Name","value":"parentConnection"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"node"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"featureType"},"value":{"kind":"EnumValue","value":"Chromosome"}}]}}]}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"edges"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"start"}},{"kind":"Field","name":{"kind":"Name","value":"end"}},{"kind":"Field","name":{"kind":"Name","value":"strand"}},{"kind":"Field","name":{"kind":"Name","value":"node"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"length"}}]}}]}}]}}]}}]}}]}}]} as unknown as DocumentNode<TableEntriesQueryQuery, TableEntriesQueryQueryVariables>;
export const SpeciesByIdQueryDocument = {"kind":"Document","definitions":[{"kind":"OperationDefinition","operation":"query","name":{"kind":"Name","value":"speciesByIdQuery"},"variableDefinitions":[{"kind":"VariableDefinition","variable":{"kind":"Variable","name":{"kind":"Name","value":"where"}},"type":{"kind":"NamedType","name":{"kind":"Name","value":"SpeciesWhere"}}},{"kind":"VariableDefinition","variable":{"kind":"Variable","name":{"kind":"Name","value":"modificationsWhere"}},"type":{"kind":"NamedType","name":{"kind":"Name","value":"ModificationWhere"}}},{"kind":"VariableDefinition","variable":{"kind":"Variable","name":{"kind":"Name","value":"targetsWhere"}},"type":{"kind":"NamedType","name":{"kind":"Name","value":"TargetWhere"}}},{"kind":"VariableDefinition","variable":{"kind":"Variable","name":{"kind":"Name","value":"guidesWhere"}},"type":{"kind":"NamedType","name":{"kind":"Name","value":"GuideWhere"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"manySpecies"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"Variable","name":{"kind":"Name","value":"where"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"shortname"}},{"kind":"Field","name":{"kind":"Name","value":"genomes"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"sequences"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"featureType"},"value":{"kind":"EnumValue","value":"Chromosome"}}]}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"length"}},{"kind":"Field","name":{"kind":"Name","value":"featuresConnection"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"node"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"featureType"},"value":{"kind":"EnumValue","value":"Guide"}}]}}]}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"totalCount"}}]}}]}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"modifications"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"Variable","name":{"kind":"Name","value":"modificationsWhere"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"result"}},{"kind":"Field","name":{"kind":"Name","value":"guidesAggregate"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"count"}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"targets"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"Variable","name":{"kind":"Name","value":"targetsWhere"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"type"}},{"kind":"Field","name":{"kind":"Name","value":"modificationsAggregate"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"count"}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"guides"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"Variable","name":{"kind":"Name","value":"guidesWhere"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"type"}},{"kind":"Field","name":{"kind":"Name","value":"subtype"}},{"kind":"Field","name":{"kind":"Name","value":"parentConnection"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"node"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"featureType"},"value":{"kind":"EnumValue","value":"Chromosome"}}]}}]}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"edges"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"start"}},{"kind":"Field","name":{"kind":"Name","value":"end"}},{"kind":"Field","name":{"kind":"Name","value":"node"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Na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as unknown as DocumentNode<SpeciesByIdQueryQuery, SpeciesByIdQueryQueryVariables>;
export const ModificationByIdQueryDocument = {"kind":"Document","definitions":[{"kind":"OperationDefinition","operation":"query","name":{"kind":"Name","value":"modificationByIdQuery"},"variableDefinitions":[{"kind":"VariableDefinition","variable":{"kind":"Variable","name":{"kind":"Name","value":"where"}},"type":{"kind":"NamedType","name":{"kind":"Name","value":"ModificationWhere"}}},{"kind":"VariableDefinition","variable":{"kind":"Variable","name":{"kind":"Name","value":"guidesWhere"}},"type":{"kind":"NamedType","name":{"kind":"Name","value":"GuideWhere"}}},{"kind":"VariableDefinition","variable":{"kind":"Variable","name":{"kind":"Name","value":"interactionsWhere"}},"type":{"kind":"NamedType","name":{"kind":"Name","value":"InteractionWhere"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"modifications"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"Variable","name":{"kind":"Name","value":"where"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"type"}},{"kind":"Field","name":{"kind":"Name","value":"result"}},{"kind":"Field","name":{"kind":"Name","value":"position"}},{"kind":"Field","name":{"kind":"Name","value":"target"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"type"}},{"kind":"Field","name":{"kind":"Name","value":"genome"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"species"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}}]}}]}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"guides"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"Variable","name":{"kind":"Name","value":"guidesWhere"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"type"}}]}},{"kind":"Field","name":{"kind":"Name","value":"interactions"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"Variable","name":{"kind":"Name","value":"interactionsWhere"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"duplexes"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"strandsConnection"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"edges"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"start"}},{"kind":"Field","name":{"kind":"Name","value":"end"}},{"kind":"Field","name":{"kind":"Name","value":"primary"}},{"kind":"Field","name":{"kind":"Name","value":"node"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"seq"}},{"kind":"Field","name":{"kind":"Name","value":"parentConnection"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"edges"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"start"}},{"kind":"Field","name":{"kind":"Name","value":"end"}}]}}]}}]}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"index"}}]}},{"kind":"Field","name":{"kind":"Name","value":"guide"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"subtype"}}]}},{"kind":"Field","name":{"kind":"Name","value":"target"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"type"}}]}}]}}]}}]} as unknown as DocumentNode<ModificationByIdQueryQuery, ModificationByIdQueryQueryVariables>;
-export const GuideByIdQueryDocument = {"kind":"Document","definitions":[{"kind":"OperationDefinition","operation":"query","name":{"kind":"Name","value":"guideByIdQuery"},"variableDefinitions":[{"kind":"VariableDefinition","variable":{"kind":"Variable","name":{"kind":"Name","value":"where"}},"type":{"kind":"NamedType","name":{"kind":"Name","value":"GuideWhere"}}},{"kind":"VariableDefinition","variable":{"kind":"Variable","name":{"kind":"Name","value":"targetsWhere"}},"type":{"kind":"NamedType","name":{"kind":"Name","value":"TargetWhere"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"guides"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"Variable","name":{"kind":"Name","value":"where"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"length"}},{"kind":"Field","name":{"kind":"Name","value":"subtype"}},{"kind":"Field","name":{"kind":"Name","value":"type"}},{"kind":"Field","name":{"kind":"Name","value":"parentConnection"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"node"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"featureType"},"value":{"kind":"EnumValue","value":"Chromosome"}}]}}]}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"edges"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"start"}},{"kind":"Field","name":{"kind":"Name","value":"end"}},{"kind":"Field","name":{"kind":"Name","value":"strand"}},{"kind":"Field","name":{"kind":"Name","value":"node"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"InlineFragment","typeCondition":{"kind":"NamedType","name":{"kind":"Name","value":"Chromosome"}},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"length"}}]}}]}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"seq"}},{"kind":"Field","name":{"kind":"Name","value":"genome"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"species"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"modifications"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"target"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"type"}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"modificationsAggregate"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"count"}}]}},{"kind":"Field","name":{"kind":"Name","value":"interactions"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"duplexes"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"strandsConnection"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"edges"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"start"}},{"kind":"Field","name":{"kind":"Name","value":"end"}},{"kind":"Field","name":{"kind":"Name","value":"primary"}},{"kind":"Field","name":{"kind":"Name","value":"node"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"seq"}},{"kind":"Field","name":{"kind":"Name","value":"parentConnection"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"edges"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"start"}},{"kind":"Field","name":{"kind":"Name","value":"end"}}]}}]}}]}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"index"}}]}},{"kind":"Field","name":{"kind":"Name","value":"modification"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"position"}},{"kind":"Field","name":{"kind":"Name","value":"result"}},{"kind":"Field","name":{"kind":"Name","value":"type"}}]}},{"kind":"Field","name":{"kind":"Name","va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as unknown as DocumentNode<GuideByIdQueryQuery, GuideByIdQueryQueryVariables>;
-export const TargetByIdQueryDocument = {"kind":"Document","definitions":[{"kind":"OperationDefinition","operation":"query","name":{"kind":"Name","value":"targetByIdQuery"},"variableDefinitions":[{"kind":"VariableDefinition","variable":{"kind":"Variable","name":{"kind":"Name","value":"where"}},"type":{"kind":"NamedType","name":{"kind":"Name","value":"TargetWhere"}}},{"kind":"VariableDefinition","variable":{"kind":"Variable","name":{"kind":"Name","value":"guidesWhere"}},"type":{"kind":"NamedType","name":{"kind":"Name","value":"GuideWhere"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"targets"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"Variable","name":{"kind":"Name","value":"where"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"length"}},{"kind":"Field","name":{"kind":"Name","value":"type"}},{"kind":"Field","name":{"kind":"Name","value":"parentConnection"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"node"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"featureType"},"value":{"kind":"EnumValue","value":"Chromosome"}}]}}]}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"edges"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"start"}},{"kind":"Field","name":{"kind":"Name","value":"end"}},{"kind":"Field","name":{"kind":"Name","value":"strand"}},{"kind":"Field","name":{"kind":"Name","value":"node"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"InlineFragment","typeCondition":{"kind":"NamedType","name":{"kind":"Name","value":"Chromosome"}},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"name"}}]}}]}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"seq"}},{"kind":"Field","name":{"kind":"Name","value":"genome"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"species"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"modifications"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"position"}}]}},{"kind":"Field","name":{"kind":"Name","value":"modificationsAggregate"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"count"}}]}},{"kind":"Field","name":{"kind":"Name","value":"interactions"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"duplexes"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"strandsConnection"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"edges"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"start"}},{"kind":"Field","name":{"kind":"Name","value":"end"}},{"kind":"Field","name":{"kind":"Name","value":"primary"}},{"kind":"Field","name":{"kind":"Name","value":"node"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"seq"}},{"kind":"Field","name":{"kind":"Name","value":"parentConnection"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"edges"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"start"}},{"kind":"Field","name":{"kind":"Name","value":"end"}}]}}]}}]}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"index"}}]}},{"kind":"Field","name":{"kind":"Name","value":"modification"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"position"}},{"kind":"Field","name":{"kind":"Name","value":"result"}},{"kind":"Field","name":{"kind":"Name","value":"type"}}]}},{"kind":"Field","name":{"kind":"Name","value":"guide"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"subtype"}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"chebi_id"}},{"kind":"Field","name":{"kind":"Name","value":"so_id"}},{"kind":"Field","name":{"kind":"Name","value":"url"}},{"kind":"Field","name":{"kind":"Name","value":"secondary_struct_file"}}]}},{"kind":"Field","name":{"kind":"Name","value":"guides"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"Variable","name":{"kind":"Name","value":"guidesWhere"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"type"}}]}}]}}]} as unknown as DocumentNode<TargetByIdQueryQuery, TargetByIdQueryQueryVariables>;
\ No newline at end of file
+export const GuideByIdQueryDocument = {"kind":"Document","definitions":[{"kind":"OperationDefinition","operation":"query","name":{"kind":"Name","value":"guideByIdQuery"},"variableDefinitions":[{"kind":"VariableDefinition","variable":{"kind":"Variable","name":{"kind":"Name","value":"where"}},"type":{"kind":"NamedType","name":{"kind":"Name","value":"GuideWhere"}}},{"kind":"VariableDefinition","variable":{"kind":"Variable","name":{"kind":"Name","value":"targetsWhere"}},"type":{"kind":"NamedType","name":{"kind":"Name","value":"TargetWhere"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"guides"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"Variable","name":{"kind":"Name","value":"where"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"length"}},{"kind":"Field","name":{"kind":"Name","value":"subtype"}},{"kind":"Field","name":{"kind":"Name","value":"type"}},{"kind":"Field","name":{"kind":"Name","value":"parentConnection"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"node"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"featureType"},"value":{"kind":"EnumValue","value":"Chromosome"}}]}}]}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"edges"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"start"}},{"kind":"Field","name":{"kind":"Name","value":"end"}},{"kind":"Field","name":{"kind":"Name","value":"strand"}},{"kind":"Field","name":{"kind":"Name","value":"node"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"InlineFragment","typeCondition":{"kind":"NamedType","name":{"kind":"Name","value":"Chromosome"}},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"length"}}]}}]}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"seq"}},{"kind":"Field","name":{"kind":"Name","value":"genome"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"species"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"modifications"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"target"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"type"}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"modificationsAggregate"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"count"}}]}},{"kind":"Field","name":{"kind":"Name","value":"interactions"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"duplexes"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"strandsConnection"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"edges"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"start"}},{"kind":"Field","name":{"kind":"Name","value":"end"}},{"kind":"Field","name":{"kind":"Name","value":"primary"}},{"kind":"Field","name":{"kind":"Name","value":"node"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"seq"}},{"kind":"Field","name":{"kind":"Name","value":"parentConnection"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"edges"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"start"}},{"kind":"Field","name":{"kind":"Name","value":"end"}}]}}]}}]}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"index"}}]}},{"kind":"Field","name":{"kind":"Name","value":"modification"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"position"}},{"kind":"Field","name":{"kind":"Name","value":"result"}},{"kind":"Field","name":{"kind":"Name","value":"type"}}]}},{"kind":"Field","name":{"kind":"Name","value":"target"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"type"}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"cluster"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}}]}},{"kind":"Field","name":{"kind":"Name","value":"clusterAggregate"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"count"}}]}},{"kind":"Field","name":{"kind":"Name","value":"chebi_id"}},{"kind":"Field","name":{"kind":"Name","value":"so_id"}}]}},{"kind":"Field","name":{"kind":"Name","value":"targets"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"Variable","name":{"kind":"Name","value":"targetsWhere"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"type"}}]}}]}}]} as unknown as DocumentNode<GuideByIdQueryQuery, GuideByIdQueryQueryVariables>;
+export const TargetByIdQueryDocument = {"kind":"Document","definitions":[{"kind":"OperationDefinition","operation":"query","name":{"kind":"Name","value":"targetByIdQuery"},"variableDefinitions":[{"kind":"VariableDefinition","variable":{"kind":"Variable","name":{"kind":"Name","value":"where"}},"type":{"kind":"NamedType","name":{"kind":"Name","value":"TargetWhere"}}},{"kind":"VariableDefinition","variable":{"kind":"Variable","name":{"kind":"Name","value":"guidesWhere"}},"type":{"kind":"NamedType","name":{"kind":"Name","value":"GuideWhere"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"targets"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"Variable","name":{"kind":"Name","value":"where"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"length"}},{"kind":"Field","name":{"kind":"Name","value":"type"}},{"kind":"Field","name":{"kind":"Name","value":"parentConnection"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"node"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"featureType"},"value":{"kind":"EnumValue","value":"Chromosome"}}]}}]}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"edges"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"start"}},{"kind":"Field","name":{"kind":"Name","value":"end"}},{"kind":"Field","name":{"kind":"Name","value":"strand"}},{"kind":"Field","name":{"kind":"Name","value":"node"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"InlineFragment","typeCondition":{"kind":"NamedType","name":{"kind":"Name","value":"Chromosome"}},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"name"}}]}}]}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"seq"}},{"kind":"Field","name":{"kind":"Name","value":"genome"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"species"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"modifications"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"position"}}]}},{"kind":"Field","name":{"kind":"Name","value":"modificationsAggregate"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"count"}}]}},{"kind":"Field","name":{"kind":"Name","value":"interactions"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"duplexes"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"strandsConnection"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"edges"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"start"}},{"kind":"Field","name":{"kind":"Name","value":"end"}},{"kind":"Field","name":{"kind":"Name","value":"primary"}},{"kind":"Field","name":{"kind":"Name","value":"node"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"seq"}},{"kind":"Field","name":{"kind":"Name","value":"parentConnection"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"edges"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"start"}},{"kind":"Field","name":{"kind":"Name","value":"end"}}]}}]}}]}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"index"}}]}},{"kind":"Field","name":{"kind":"Name","value":"modification"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"position"}},{"kind":"Field","name":{"kind":"Name","value":"result"}},{"kind":"Field","name":{"kind":"Name","value":"type"}}]}},{"kind":"Field","name":{"kind":"Name","value":"guide"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"subtype"}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"chebi_id"}},{"kind":"Field","name":{"kind":"Name","value":"so_id"}},{"kind":"Field","name":{"kind":"Name","value":"url"}},{"kind":"Field","name":{"kind":"Name","value":"secondary_struct_file"}}]}},{"kind":"Field","name":{"kind":"Name","value":"guides"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"Variable","name":{"kind":"Name","value":"guidesWhere"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"type"}}]}}]}}]} as unknown as DocumentNode<TargetByIdQueryQuery, TargetByIdQueryQueryVariables>;
+export const ClusterByIdQueryDocument = {"kind":"Document","definitions":[{"kind":"OperationDefinition","operation":"query","name":{"kind":"Name","value":"clusterByIdQuery"},"variableDefinitions":[{"kind":"VariableDefinition","variable":{"kind":"Variable","name":{"kind":"Name","value":"where"}},"type":{"kind":"NamedType","name":{"kind":"Name","value":"ClusterWhere"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"clusters"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"Variable","name":{"kind":"Name","value":"where"}}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"guides"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"type"}},{"kind":"Field","name":{"kind":"Name","value":"subtype"}},{"kind":"Field","name":{"kind":"Name","value":"modificationsAggregate"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"count"}}]}},{"kind":"Field","name":{"kind":"Name","value":"parentConnection"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"where"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"node"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"featureType"},"value":{"kind":"EnumValue","value":"Chromosome"}}]}}]}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"edges"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"start"}},{"kind":"Field","name":{"kind":"Name","value":"end"}}]}}]}}]}},{"kind":"Field","name":{"kind":"Name","value":"guidesAggregate"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"count"}}]}},{"kind":"Field","alias":{"kind":"Name","value":"referenceGuide"},"name":{"kind":"Name","value":"guides"},"arguments":[{"kind":"Argument","name":{"kind":"Name","value":"options"},"value":{"kind":"ObjectValue","fields":[{"kind":"ObjectField","name":{"kind":"Name","value":"limit"},"value":{"kind":"IntValue","value":"1"}}]}}],"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"parent"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"id"}},{"kind":"Field","name":{"kind":"Name","value":"name"}}]}},{"kind":"Field","name":{"kind":"Name","value":"genome"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"species"},"selectionSet":{"kind":"SelectionSet","selections":[{"kind":"Field","name":{"kind":"Name","value":"name"}},{"kind":"Field","name":{"kind":"Name","value":"id"}}]}}]}}]}}]}}]}}]} as unknown as DocumentNode<ClusterByIdQueryQuery, ClusterByIdQueryQueryVariables>;
\ No newline at end of file
diff --git a/src/gql/queries.ts b/src/gql/queries.ts
index 7fa9bd911c70db8adc8dd13d1ccb41988107c8cf..7efed875cde7f2b120c2a3caa8fee9f7f64fc41a 100644
--- a/src/gql/queries.ts
+++ b/src/gql/queries.ts
@@ -285,6 +285,12 @@ export const guideByIdQuery = graphql(/* GraphQL */ `
type
}
}
+ cluster {
+ id
+ }
+ clusterAggregate {
+ count
+ }
chebi_id
so_id
}
@@ -378,3 +384,44 @@ export const targetByIdQuery = graphql(/* GraphQL */ `
}
}
`)
+
+/**
+ * Get data about a cluster by its ID
+ */
+export const clusterByIdQuery = graphql(/* GraphQL */ `
+ query clusterByIdQuery($where: ClusterWhere) {
+ clusters(where: $where) {
+ id
+ guides {
+ id
+ name
+ type
+ subtype
+ modificationsAggregate {
+ count
+ }
+ parentConnection(where: { node: { featureType: Chromosome } }) {
+ edges {
+ start
+ end
+ }
+ }
+ }
+ guidesAggregate {
+ count
+ }
+ referenceGuide: guides(options: { limit: 1 }) {
+ parent {
+ id
+ name
+ }
+ genome {
+ species {
+ name
+ id
+ }
+ }
+ }
+ }
+ }
+`)
diff --git a/src/router/index.ts b/src/router/index.ts
index 3fd97b04f4ead989ba4a10d6d059921695858fdd..9e13883c7c6672685e1c2aa7b07961dd80963060 100644
--- a/src/router/index.ts
+++ b/src/router/index.ts
@@ -87,6 +87,17 @@ const router = createRouter({
router.replace({ name: 'lost' })
}
}
+ },
+ {
+ path: 'cluster/:id',
+ name: 'clusterDetails',
+ component: () => import('@/views/ClusterView.vue'),
+ props: (to) => ({ clusterId: to.params.id }),
+ beforeEnter: async (to) => {
+ if (typeof to.params.id !== 'string') {
+ router.replace({ name: 'lost' })
+ }
+ }
}
]
},
diff --git a/src/views/ClusterView.vue b/src/views/ClusterView.vue
new file mode 100644
index 0000000000000000000000000000000000000000..688924d055f1a05322e6ab7849d389175a266650
--- /dev/null
+++ b/src/views/ClusterView.vue
@@ -0,0 +1,274 @@
+<script setup lang="ts">
+/**
+ * Vue imports
+ */
+import { computed } from 'vue'
+/**
+ * Components imports
+ */
+import MainLayout from '@/layouts/MainLayout.vue'
+import BaseLinkListCard from '@/components/BaseLinkListCard.vue'
+import Divider from 'primevue/divider'
+import Panel from 'primevue/panel'
+import IconFa6SolidCircleInfo from '~icons/fa6-solid/circle-info'
+import IconFa6SolidArrowUpRightFromSquare from '~icons/fa6-solid/arrow-up-right-from-square'
+import IconFa6SolidList from '~icons/fa6-solid/list'
+import IconEmojioneThinkingFace from '~icons/emojione/thinking-face'
+/**
+ * Other 3rd-party imports
+ */
+import { omit as _omit, minBy as _minBy, maxBy as _maxBy } from 'lodash-es'
+import { useQuery } from '@urql/vue'
+import { useTitle } from '@vueuse/core'
+/**
+ * Types imports
+ */
+
+import type { LinkListItemModel } from '@/components/BaseLinkListCard.vue'
+/**
+ * Utils imports
+ */
+import {
+ formatGuideSubtype,
+ formatSpeciesName,
+ separateThousands
+} from '@/utils/format'
+import { clusterByIdQuery } from '@/gql/queries'
+
+/**
+ * Component props
+ */
+const props = defineProps<{
+ // The ID of the cluster to display
+ clusterId: string
+}>()
+
+/**
+ * Reactive urql GraphQL query object, updated with query state & response
+ */
+const gqlQuery = useQuery({
+ query: clusterByIdQuery,
+ variables: {
+ where: { id: props.clusterId }
+ }
+})
+
+/**
+ * The cluster to display, reactively updated when fetched
+ */
+const cluster = computed(() =>
+ _omit(
+ {
+ ...gqlQuery.data.value?.clusters[0],
+ ...gqlQuery.data.value?.clusters[0].referenceGuide[0]
+ },
+ ['referenceGuide']
+ )
+)
+
+/**
+ * Title of the page, reactively updated when data is fetched
+ */
+const pageTitle = computed(() =>
+ cluster.value
+ ? `${cluster.value.id} • Cluster | SnoBoard`
+ : 'Cluster | SnoBoard'
+)
+// Bind actual page title to computed one
+useTitle(pageTitle)
+
+/**
+ * Species name, formatted for display
+ */
+const formattedSpeciesName = computed(() =>
+ formatSpeciesName(cluster.value?.genome?.species?.name || '')
+)
+
+/**
+ * First guide in the cluster
+ */
+const firstGuide = computed(() =>
+ _minBy(cluster.value.guides, 'parentConnection.edges[0].start')
+)
+
+/**
+ * First guide in the cluster
+ */
+const lastGuide = computed(() =>
+ _maxBy(cluster.value.guides, 'parentConnection.edges[0].end')
+)
+
+/**
+ * Guides of the cluster, formatted for use in a link list
+ */
+const linkListGuides = computed<LinkListItemModel[]>(
+ () =>
+ cluster.value.guides?.map((guide) => ({
+ id: guide.id,
+ link: {
+ name: 'guideDetails',
+ params: { id: guide.id }
+ },
+ title: guide.name || guide.id,
+ subtitle: guide.id,
+ details: [
+ guide.type,
+ formatGuideSubtype(guide.subtype),
+ `${guide.modificationsAggregate?.count} guided modification${
+ (guide.modificationsAggregate?.count || 0) > 1 ? 's' : ''
+ }`
+ ]
+ })) || []
+)
+</script>
+
+<template>
+ <MainLayout>
+ <h1 class="mb-4 text-center text-3xl">Cluster</h1>
+ <h2 class="mb-8 text-center text-xl italic text-slate-400">
+ {{ cluster.id }}
+ </h2>
+
+ <Panel
+ toggleable
+ class="mx-auto mb-8 max-w-6xl text-center 2xl:max-w-7xl"
+ :pt="{
+ header: { class: '!bg-slate-50' },
+ toggler: { class: 'hover:!bg-slate-100' }
+ }"
+ >
+ <template #header="scope">
+ <icon-fa6-solid-circle-info :class="scope.class" />
+ <span :id="scope.id" class="p-panel-title">Informations</span>
+ </template>
+ <div class="gap grid grid-cols-3">
+ <div
+ class="relative italic text-slate-400 after:absolute after:-right-[1px] after:h-full after:rounded after:border-l-[1px] after:border-slate-200"
+ >
+ Chromosome:
+ <em class="text-lg font-bold italic text-slate-700">
+ {{ cluster.parent?.name }}
+ </em>
+ </div>
+ <div
+ class="relative italic text-slate-400 after:absolute after:-right-[1px] after:h-full after:rounded after:border-l-[1px] after:border-slate-200"
+ >
+ Guide count in cluster:
+ <em class="text-lg font-bold italic text-slate-700">
+ {{ cluster?.guidesAggregate?.count }}
+ </em>
+ </div>
+ <div class="italic text-slate-400">
+ Species:
+ <RouterLink
+ v-if="cluster?.genome?.species?.name"
+ :to="{
+ name: 'statistics',
+ params: { id: cluster.genome.species.id }
+ }"
+ class="text-lg font-bold italic text-slate-700 underline transition-all duration-300 ease-in-out hover:text-indigo-600"
+ >
+ {{ formattedSpeciesName }}
+ <sup>
+ <icon-fa6-solid-arrow-up-right-from-square class="inline" />
+ </sup>
+ </RouterLink>
+ </div>
+
+ <Divider class="col-span-3" />
+
+ <div class="col-span-3 grid grid-cols-2">
+ <div
+ class="relative italic text-slate-400 after:absolute after:-right-[1px] after:h-full after:rounded after:border-l-[1px] after:border-slate-200"
+ >
+ <span v-tooltip.top="firstGuide?.name || '...'">First guide</span>
+ location:
+ <span v-if="firstGuide" class="not-italic text-slate-700">
+ <em
+ v-tooltip.top="
+ `Start position: ${separateThousands(
+ firstGuide.parentConnection.edges[0].start
+ )}`
+ "
+ class="text-lg font-bold not-italic"
+ >
+ {{
+ separateThousands(firstGuide.parentConnection.edges[0].start)
+ }}
+ </em>
+ –
+ <em
+ v-tooltip.top="
+ `End position: ${separateThousands(
+ firstGuide.parentConnection.edges[0].end
+ )}`
+ "
+ class="text-lg font-bold not-italic"
+ >
+ {{
+ separateThousands(firstGuide.parentConnection.edges[0].end)
+ }}
+ </em>
+ </span>
+ <em v-else>?</em>
+ </div>
+ <div class="italic text-slate-400">
+ <span v-tooltip.top="lastGuide?.name || '...'">Last guide</span>
+ location:
+ <span v-if="lastGuide" class="not-italic text-slate-700">
+ <em
+ v-tooltip.top="
+ `Start position: ${separateThousands(
+ lastGuide.parentConnection.edges[0].start
+ )}`
+ "
+ class="text-lg font-bold not-italic"
+ >
+ {{
+ separateThousands(lastGuide.parentConnection.edges[0].start)
+ }}
+ </em>
+ –
+ <em
+ v-tooltip.top="
+ `End position: ${separateThousands(
+ lastGuide.parentConnection.edges[0].end
+ )}`
+ "
+ class="text-lg font-bold not-italic"
+ >
+ {{ separateThousands(lastGuide.parentConnection.edges[0].end) }}
+ </em>
+ </span>
+ <em v-else>?</em>
+ </div>
+ </div>
+
+ <Divider class="col-span-3" />
+
+ <div class="col-span-3 text-left italic text-slate-400">
+ Reference genome:
+ <em class="text-lg font-bold not-italic text-slate-700">??</em>
+ </div>
+ </div>
+ </Panel>
+
+ <Panel toggleable class="mx-auto max-w-6xl">
+ <template #header="scope">
+ <icon-fa6-solid-list :class="scope.class" />
+ <span :id="scope.id" class="p-panel-title"
+ >Guides in cluster ({{
+ cluster.guidesAggregate?.count || '...'
+ }})</span
+ >
+ </template>
+ <BaseLinkListCard :link-items="linkListGuides">
+ <template #disabled>
+ No guide in this cluster ? Hmmm...
+ <icon-emojione-thinking-face /></template
+ ></BaseLinkListCard>
+ </Panel>
+ </MainLayout>
+</template>
+
+<style></style>
diff --git a/src/views/GuideView.vue b/src/views/GuideView.vue
index ed5869558cf30ea70a565449232ffd39ede5d17b..acd6adcce68617f79de803630b41b8ec145b6649 100644
--- a/src/views/GuideView.vue
+++ b/src/views/GuideView.vue
@@ -350,13 +350,13 @@ const ontologyLinks = computed(() => ({
<div
class="relative italic text-slate-400 after:absolute after:-right-[1px] after:h-full after:rounded after:border-l-[1px] after:border-slate-200"
>
- Guide type :
+ Guide type:
<em class="text-lg font-bold italic text-slate-700"
>{{ formattedGuideSubtype }} {{ guide?.type }}</em
>
</div>
<div class="italic text-slate-400">
- Species :
+ Species:
<RouterLink
v-if="guide?.genome?.species?.name"
:to="{
@@ -374,8 +374,16 @@ const ontologyLinks = computed(() => ({
<Divider class="col-span-2" />
- <div class="col-span-2 text-left italic text-slate-400">
- Location :
+ <div
+ :class="[
+ guide?.cluster
+ ? 'relative after:absolute after:-right-[1px] after:h-full after:rounded after:border-l-[1px] after:border-slate-200'
+ : 'col-span-2',
+
+ 'text-left italic text-slate-400'
+ ]"
+ >
+ Location:
<span
v-if="guideParentChromosome && guideParentChromosomeLocation"
class="not-italic text-slate-700"
@@ -408,7 +416,7 @@ const ontologyLinks = computed(() => ({
>
{{ separateThousands(guideParentChromosomeLocation.end) }}
</em>
- (strand :
+ (strand:
<em class="inline-block font-bold not-italic"
><span class="flex items-center gap-2">
{{ guideParentChromosomeLocation.strand }}
@@ -425,17 +433,34 @@ const ontologyLinks = computed(() => ({
<em v-else>?</em>
</div>
+ <div v-if="guide?.cluster" class="italic text-slate-400">
+ Cluster:
+ <RouterLink
+ :key="guide.cluster.id"
+ :to="{
+ name: 'clusterDetails',
+ params: { id: guide.cluster.id }
+ }"
+ >
+ <Chip
+ class="ml-2 border-2 !border-slate-600 !bg-slate-100 !font-semibold !text-slate-600"
+ >
+ {{ guide.cluster.id }}
+ </Chip>
+ </RouterLink>
+ </div>
+
<Divider class="col-span-2" />
<div class="col-span-2 text-left italic text-slate-400">
- Reference genome :
+ Reference genome:
<em class="text-lg font-bold not-italic text-slate-700">??</em>
</div>
<Divider class="col-span-2" />
<div class="col-span-2 text-left italic text-slate-400">
- Guided modifications ({{ linkedModificationsCount }}) :
+ Guided modifications ({{ linkedModificationsCount }}):
<RouterLink
v-for="modification in guide?.modifications"
:key="modification.id"
@@ -455,7 +480,7 @@ const ontologyLinks = computed(() => ({
<Divider class="col-span-2" />
<div class="col-span-2 text-left italic text-slate-400">
- Targets ({{ linkedTargetsCount }}) :
+ Targets ({{ linkedTargetsCount }}):
<RouterLink
v-for="target in linkedTargets"
:key="target.id"
@@ -476,7 +501,7 @@ const ontologyLinks = computed(() => ({
<Divider class="col-span-2" />
<div class="col-span-2 text-left italic text-slate-400">
- Ontologies :
+ Ontologies:
<a :href="ontologyLinks.SO">
<Chip
class="ml-2 border-2 !border-red-600 !bg-red-100 !pl-0 !font-semibold !text-red-600"
diff --git a/src/views/HomeView.vue b/src/views/HomeView.vue
index bb5ae7f7304913cd2134ded45429cbe4ff904358..b6d88936c02f89b00f2ff06f90516162a8831bda 100644
--- a/src/views/HomeView.vue
+++ b/src/views/HomeView.vue
@@ -72,7 +72,7 @@ const selectedSpeciesId = ref<number>()
</template>
<template #hint>
- <span>Examples : ...</span>
+ <span>Examples: ...</span>
</template>
<template #button>
diff --git a/src/views/ModificationView.vue b/src/views/ModificationView.vue
index 9d447de4cc78feb3fa28f6e05c978b57e2b0a06c..92f92f4fc303d0769dbef0404c51657798d03331 100644
--- a/src/views/ModificationView.vue
+++ b/src/views/ModificationView.vue
@@ -228,7 +228,7 @@ const linkedGuidesCount = computed(() =>
<div
class="relative italic text-slate-400 after:absolute after:-right-[1px] after:h-full after:rounded after:border-l-[1px] after:border-slate-200"
>
- Modification type :
+ Modification type:
<em class="text-lg font-bold not-italic text-slate-700">
<FormattedModificationType
v-if="modification?.type"
@@ -250,7 +250,7 @@ const linkedGuidesCount = computed(() =>
<div
class="relative italic text-slate-400 after:absolute after:-right-[1px] after:h-full after:rounded after:border-l-[1px] after:border-slate-200"
>
- Target :
+ Target:
<RouterLink
:to="{
name: 'targetDetails',
@@ -266,7 +266,7 @@ const linkedGuidesCount = computed(() =>
</RouterLink>
</div>
<div class="italic text-slate-400">
- Species :
+ Species:
<RouterLink
v-if="modification?.target.genome?.species?.name"
:to="{
@@ -294,7 +294,7 @@ const linkedGuidesCount = computed(() =>
<Divider class="col-span-3" />
<div class="col-span-3 text-left italic text-slate-400">
- Reference genome :
+ Reference genome:
<em class="text-lg font-bold not-italic text-slate-700">??</em>
</div>
@@ -302,7 +302,7 @@ const linkedGuidesCount = computed(() =>
<div class="col-span-3 flex gap-2 text-left italic text-slate-400">
<span class="whitespace-nowrap"
- >Guides ({{ linkedGuidesCount }}) :</span
+ >Guides ({{ linkedGuidesCount }}):</span
>
<div class="flex flex-wrap justify-between gap-x-2 gap-y-1">
<RouterLink
@@ -324,7 +324,7 @@ const linkedGuidesCount = computed(() =>
<!-- <Divider class="col-span-3" />
<div class="col-span-3 text-left italic text-slate-400">
- References :
+ References:
<a :href="referenceLinks.SO">
<Chip
class="ml-2 border-2 !border-red-600 !bg-red-100 !pl-0 !font-semibold !text-red-600"
diff --git a/src/views/StatisticsView.vue b/src/views/StatisticsView.vue
index e7f74eb0b4441b751471813892097c739087612d..34206a0a45546f07374f326321570fad25b03427 100644
--- a/src/views/StatisticsView.vue
+++ b/src/views/StatisticsView.vue
@@ -446,6 +446,7 @@ const coverages = computed(() => ({
<BaseLinkListCard
ref="linkListCardComponent"
:color="colorByField[selectedField]"
+ outlined
:link-items="itemsByField[selectedField] || []"
:disabled="selectedField === 'none'"
>
@@ -491,7 +492,7 @@ const coverages = computed(() => ({
}"
>
<div class="mb-8 text-center italic text-slate-400">
- Length :
+ Length:
<em class="text-lg font-bold not-italic text-slate-700">{{
chromosome.length
}}</em>
@@ -500,6 +501,7 @@ const coverages = computed(() => ({
list-title="Guides list"
:link-items="guidesByKaryotypeChromosome[chromosome.id]"
color="sky"
+ outlined
:hover-event="true"
@enter-item="highlightObject"
@leave-item="unhighlightObject"
diff --git a/src/views/TargetView.vue b/src/views/TargetView.vue
index db8b063f640879f95cf871d1247b72738279e2ce..4a76c44191ad327847a580ca32c6ba77e6534421 100644
--- a/src/views/TargetView.vue
+++ b/src/views/TargetView.vue
@@ -303,7 +303,7 @@ const ontologyLinks = computed(() => ({
<div
class="relative italic text-slate-400 after:absolute after:-right-[1px] after:h-full after:rounded after:border-l-[1px] after:border-slate-200"
>
- Target type :
+ Target type:
<em class="text-lg font-bold not-italic text-slate-700">{{
target?.type
}}</em>
@@ -311,13 +311,13 @@ const ontologyLinks = computed(() => ({
<div
class="relative italic text-slate-400 after:absolute after:-right-[1px] after:h-full after:rounded after:border-l-[1px] after:border-slate-200"
>
- Target length :
+ Target length:
<em class="text-lg font-bold not-italic text-slate-700">{{
target?.length
}}</em>
</div>
<div class="italic text-slate-400">
- Species :
+ Species:
<RouterLink
v-if="target?.genome?.species?.name"
:to="{
@@ -336,7 +336,7 @@ const ontologyLinks = computed(() => ({
<Divider class="col-span-3" />
<div class="col-span-3 text-left italic text-slate-400">
- Location :
+ Location:
<span
v-if="targetParentChromosome && targetParentChromosomeLocation"
class="not-italic text-slate-700"
@@ -369,7 +369,7 @@ const ontologyLinks = computed(() => ({
>
{{ separateThousands(targetParentChromosomeLocation.end) }}
</em>
- (strand :
+ (strand:
<em class="inline-block font-bold not-italic"
><span class="flex items-center gap-2">
{{ targetParentChromosomeLocation.strand }}
@@ -389,7 +389,7 @@ const ontologyLinks = computed(() => ({
<Divider class="col-span-3" />
<div class="col-span-3 text-left italic text-slate-400">
- Reference genome :
+ Reference genome:
<em class="text-lg font-bold not-italic text-slate-700">??</em>
</div>
@@ -397,7 +397,7 @@ const ontologyLinks = computed(() => ({
<div class="col-span-3 flex gap-2 text-left italic text-slate-400">
<span class="whitespace-nowrap"
- >Modifications ({{ linkedModificationsCount }}) :</span
+ >Modifications ({{ linkedModificationsCount }}):</span
>
<div class="flex flex-wrap justify-between gap-x-2 gap-y-1">
<RouterLink
@@ -422,7 +422,7 @@ const ontologyLinks = computed(() => ({
<div class="col-span-3 flex gap-2 text-left italic text-slate-400">
<span class="whitespace-nowrap"
- >Guides ({{ linkedGuidesCount }}) :</span
+ >Guides ({{ linkedGuidesCount }}):</span
>
<div class="flex flex-wrap justify-between gap-x-2 gap-y-1">
<RouterLink
@@ -444,7 +444,7 @@ const ontologyLinks = computed(() => ({
<Divider class="col-span-3" />
<div class="col-span-3 text-left italic text-slate-400">
- Ontologies :
+ Ontologies:
<a :href="ontologyLinks.SO">
<Chip
class="ml-2 border-2 !border-red-600 !bg-red-100 !pl-0 !font-semibold !text-red-600"